WormBase Tree Display for CDS: PPA18748
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PPA18748 | Evidence | Inferred_automatically | make_isoforms.pl | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrX | |||
Structure | Source_exons (12) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S293-3.2 | ||
DB_remark | PPA-SLC-17.1 protein; contains similarity to Pfam domain PF07690 (Major Facilitator Superfamily); contains similarity to Interpro domains IPR011701 (Major facilitator superfamily), IPR036259 (MFS transporter superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108302 | ||||
Corresponding_transcript | PPA18748.1 | |||||
Corresponding_protein | PP67291 | |||||
Corresponding_oligo_set | GPL14372_Probes_75531 | |||||
GPL14372_Probes_75532 | ||||||
GPL14372_Probes_75533 | ||||||
GPL14372_Probes_75534 | ||||||
Microarray_results | GPL14372_Probes_75531 | |||||
GPL14372_Probes_75532 | ||||||
GPL14372_Probes_75533 | ||||||
GPL14372_Probes_75534 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.66167 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S293-3.2 | Curator_confirmed | WBPerson4055 | |||
Method | curated |