WormBase Tree Display for CDS: PPA18906
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PPA18906 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (16) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-19.65 | ||
DB_remark | PPA-RMH-2 protein; contains similarity to Pfam domain PF08585 (RMI1, N-terminal OB-fold domain); contains similarity to Interpro domains IPR039215 (), IPR042470 (RecQ mediated genome instability protein, N-terminal OB-fold domain superfamily), IPR033472 (), IPR013894 (RecQ mediated genome instability protein 1, OB-fold domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108460 | ||||
Corresponding_transcript | PPA18906.1 | |||||
Corresponding_protein | PP55651 | |||||
RNASeq_FPKM | WBls:0000032 | 8.99435 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 8.49786 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-19.65 | Curator_confirmed | WBPerson4055 | |||
Method | curated |