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WormBase Tree Display for CDS: PPA18975

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Name Class

PPA18975SMapS_parentSequencePPA_ChrI
StructureSource_exons (30)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-25.11
DB_remarkcontains similarity to Pfam domain PF02171 (Piwi domain); contains similarity to Interpro domains IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR003165 (Piwi domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108529
Corresponding_transcriptPPA18975.1
Corresponding_proteinPP70581
Corresponding_oligo_setGPL14372_Probes_27794
GPL14372_Probes_27795
GPL14372_Probes_27796
GPL14372_Probes_27797
GPL14372_Probes_83129
Microarray_resultsGPL14372_Probes_27794
GPL14372_Probes_27795
GPL14372_Probes_27796
GPL14372_Probes_27797
GPL14372_Probes_83129
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-25.11Curator_confirmedWBPerson4055
Methodcurated