WormBase Tree Display for CDS: PPA18975
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PPA18975 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (30) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-25.11 | ||
DB_remark | contains similarity to Pfam domain PF02171 (Piwi domain); contains similarity to Interpro domains IPR036085 (PAZ domain superfamily), IPR012337 (Ribonuclease H-like superfamily), IPR036397 (Ribonuclease H superfamily), IPR003165 (Piwi domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108529 | ||||
Corresponding_transcript | PPA18975.1 | |||||
Corresponding_protein | PP70581 | |||||
Corresponding_oligo_set | GPL14372_Probes_27794 | |||||
GPL14372_Probes_27795 | ||||||
GPL14372_Probes_27796 | ||||||
GPL14372_Probes_27797 | ||||||
GPL14372_Probes_83129 | ||||||
Microarray_results | GPL14372_Probes_27794 | |||||
GPL14372_Probes_27795 | ||||||
GPL14372_Probes_27796 | ||||||
GPL14372_Probes_27797 | ||||||
GPL14372_Probes_83129 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-25.11 | Curator_confirmed | WBPerson4055 | |||
Method | curated |