WormBase Tree Display for CDS: PPA18992
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PPA18992 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 82 | |||
221 | 358 | |||||
625 | 801 | |||||
1506 | 1617 | |||||
2785 | 2887 | |||||
3362 | 3427 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S71-26.57 | ||
TREEFAM | TREEFAM_ID | TF313162 | ||||
DB_remark | PPA-CLIC-1 protein; contains similarity to Pfam domain PF01086 (Clathrin light chain); contains similarity to Interpro domain IPR000996 (Clathrin light chain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00108546 | ||||
Corresponding_transcript | PPA18992.1 | |||||
Corresponding_protein | PP16936 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 24.077 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S71-26.57 | Curator_confirmed | WBPerson4055 | |||
Method | curated |