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WormBase Tree Display for CDS: PPA19026

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Name Class

PPA19026SMapS_parentSequencePPA_ChrI
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S71-27.31
TREEFAMTREEFAM_IDTF105779
DB_remarkPPA-SRPA-68 protein; contains similarity to Pfam domain PF16969 (RNA-binding signal recognition particle 68); contains similarity to Interpro domains IPR038253 (SRP68, N-terminal domain superfamily), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR026258 (Signal recognition particle subunit SRP68)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108580
Corresponding_transcriptPPA19026.1
Corresponding_proteinPP73729
Corresponding_oligo_setGPL14372_Probes_83067
GPL14372_Probes_83070
Microarray_resultsGPL14372_Probes_83067
GPL14372_Probes_83070
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S71-27.31Curator_confirmedWBPerson4055
Methodcurated