WormBase Tree Display for CDS: PPA19026
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PPA19026 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (26) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S71-27.31 | ||
TREEFAM | TREEFAM_ID | TF105779 | ||||
DB_remark | PPA-SRPA-68 protein; contains similarity to Pfam domain PF16969 (RNA-binding signal recognition particle 68); contains similarity to Interpro domains IPR038253 (SRP68, N-terminal domain superfamily), IPR011990 (Tetratricopeptide-like helical domain superfamily), IPR026258 (Signal recognition particle subunit SRP68) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108580 | ||||
Corresponding_transcript | PPA19026.1 | |||||
Corresponding_protein | PP73729 | |||||
Corresponding_oligo_set | GPL14372_Probes_83067 | |||||
GPL14372_Probes_83070 | ||||||
Microarray_results | GPL14372_Probes_83067 | |||||
GPL14372_Probes_83070 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S71-27.31 | Curator_confirmed | WBPerson4055 | |||
Method | curated |