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WormBase Tree Display for CDS: PPA19086

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Name Class

PPA19086SMapS_parentSequencePPA_ChrI
StructureSource_exons (27)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S71-30.35
TREEFAMTREEFAM_IDTF315073
DB_remarkcontains similarity to Pfam domain PF02475 (Met-10+ like-protein); contains similarity to Interpro domains IPR029063 (S-adenosyl-L-methionine-dependent methyltransferase superfamily), IPR030382 (SAM-dependent methyltransferase TRM5/TYW2-type), IPR032675 (Leucine-rich repeat domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00108640
Corresponding_transcriptPPA19086.1
Corresponding_proteinPP73858
Corresponding_oligo_setGPL14372_Probes_82961
GPL14372_Probes_82962
GPL14372_Probes_82965
GPL14372_Probes_82966
Microarray_resultsGPL14372_Probes_82961
GPL14372_Probes_82962
GPL14372_Probes_82965
GPL14372_Probes_82966
RNASeq_FPKMWBls:000003212.2261From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010115.288From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S71-30.35Curator_confirmedWBPerson4055
Methodcurated