WormBase Tree Display for CDS: PPA19100
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PPA19100 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (19) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S71-31.64 | ||
DB_remark | contains similarity to Pfam domain PF02535 (ZIP Zinc transporter); contains similarity to Interpro domain IPR003689 (Zinc/iron permease) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108654 | ||||
Corresponding_transcript | PPA19100.1 | |||||
Corresponding_protein | PP75719 | |||||
Corresponding_oligo_set | GPL14372_Probes_82949 | |||||
GPL14372_Probes_82950 | ||||||
GPL14372_Probes_82951 | ||||||
Microarray_results | GPL14372_Probes_82949 | |||||
GPL14372_Probes_82950 | ||||||
GPL14372_Probes_82951 | ||||||
RNASeq_FPKM | WBls:0000032 | 5.12078 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.02397 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 08 Nov 2019 10:21:37 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMS-S71-31.64 | Curator_confirmed | WBPerson4055 | |||
[191108 mh6] This CDS has been updated based on the RNAseq data. | Curator_confirmed | WBPerson4055 | ||||
From_analysis | RNASeq | |||||
Method | curated |