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WormBase Tree Display for CDS: PPA19100

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Name Class

PPA19100EvidenceCurator_confirmedWBPerson4055
SMapS_parentSequencePPA_ChrI
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S71-31.64
DB_remarkcontains similarity to Pfam domain PF02535 (ZIP Zinc transporter); contains similarity to Interpro domain IPR003689 (Zinc/iron permease)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108654
Corresponding_transcriptPPA19100.1
Corresponding_proteinPP75719
Corresponding_oligo_setGPL14372_Probes_82949
GPL14372_Probes_82950
GPL14372_Probes_82951
Microarray_resultsGPL14372_Probes_82949
GPL14372_Probes_82950
GPL14372_Probes_82951
RNASeq_FPKMWBls:00000325.12078From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.02397From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed08 Nov 2019 10:21:37WBPerson4055
Remark[171116 mh6] renamed from gene-UMS-S71-31.64Curator_confirmedWBPerson4055
[191108 mh6] This CDS has been updated based on the RNAseq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated