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WormBase Tree Display for CDS: PPA19140

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Name Class

PPA19140SMapS_parentSequencePPA_ChrII
StructureSource_exons (19)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-34.45
DB_remarkcontains similarity to Pfam domains PF00852 (Glycosyltransferase family 10 (fucosyltransferase) C-term), PF17039 (Fucosyltransferase, N-terminal); contains similarity to Interpro domains IPR038577 (GT10-like, C-terminal domain superfamily), IPR001503 (Glycosyl transferase family 10), IPR031481 (Fucosyltransferase, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108694
Corresponding_transcriptPPA19140.1
Corresponding_proteinPP66200
Corresponding_oligo_setGPL14372_Probes_72854
GPL14372_Probes_85290
Microarray_resultsGPL14372_Probes_72854
GPL14372_Probes_85290
RNASeq_FPKMWBls:00000325.25834From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010124.8418From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-34.45Curator_confirmedWBPerson4055
Methodcurated