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WormBase Tree Display for CDS: PPA19170

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Name Class

PPA19170SMapS_parentSequencePPA_ChrII
StructureSource_exons (26)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-9.0
DB_remarkcontains similarity to Pfam domain PF00288 (GHMP kinases N terminal domain); contains similarity to Interpro domains IPR020568 (Ribosomal protein uS5 domain 2-type superfamily), IPR036554 (GHMP kinase, C-terminal domain superfamily), IPR006204 (GHMP kinase N-terminal domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
Start_not_found1
VisibleGeneWBGene00108724
Corresponding_transcriptPPA19170.1
Corresponding_proteinPP51541
Corresponding_oligo_setGPL14372_Probes_27299
GPL14372_Probes_27300
GPL14372_Probes_27302
Microarray_resultsGPL14372_Probes_27299
GPL14372_Probes_27300
GPL14372_Probes_27302
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-9.0Curator_confirmedWBPerson4055
Methodcurated