WormBase Tree Display for CDS: PPA19220
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PPA19220 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 81 | |||
193 | 231 | |||||
483 | 575 | |||||
1137 | 1232 | |||||
1463 | 1534 | |||||
1675 | 1761 | |||||
10765 | 10852 | |||||
10961 | 11060 | |||||
11233 | 11293 | |||||
11414 | 11473 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-11.41 | ||
DB_remark | contains similarity to Pfam domain PF10323 (Serpentine type 7TM GPCR chemoreceptor Srv); contains similarity to Interpro domain IPR019426 (7TM GPCR, serpentine receptor class v (Srv)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
End_not_found | ||||||
Visible | Gene | WBGene00108774 | ||||
Corresponding_transcript | PPA19220.1 | |||||
Corresponding_protein | PP73237 | |||||
Corresponding_oligo_set | GPL14372_Probes_27271 | |||||
GPL14372_Probes_27272 | ||||||
GPL14372_Probes_27273 | ||||||
GPL14372_Probes_27274 | ||||||
Microarray_results | GPL14372_Probes_27271 | |||||
GPL14372_Probes_27272 | ||||||
GPL14372_Probes_27273 | ||||||
GPL14372_Probes_27274 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-11.41 | Curator_confirmed | WBPerson4055 | |||
Method | curated |