WormBase Tree Display for CDS: PPA19237
expand all nodes | collapse all nodes | view schema
PPA19237 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 129 | |||
177 | 253 | |||||
296 | 442 | |||||
686 | 773 | |||||
1152 | 1248 | |||||
1460 | 1557 | |||||
1682 | 1756 | |||||
1973 | 2086 | |||||
2882 | 2893 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-12.6 | ||
DB_remark | contains similarity to Pfam domain PF10317 (Serpentine type 7TM GPCR chemoreceptor Srd); contains similarity to Interpro domain IPR019421 (7TM GPCR, serpentine receptor class d (Srd)) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00108791 | ||||
Corresponding_transcript | PPA19237.1 | |||||
Corresponding_protein | PP66507 | |||||
Corresponding_oligo_set | GPL14372_Probes_27240 | |||||
GPL14372_Probes_27242 | ||||||
GPL14372_Probes_27243 | ||||||
Microarray_results | GPL14372_Probes_27240 | |||||
GPL14372_Probes_27242 | ||||||
GPL14372_Probes_27243 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-12.6 | Curator_confirmed | WBPerson4055 | |||
Method | curated |