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WormBase Tree Display for CDS: PPA19410

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Name Class

PPA19410SMapS_parentSequencePPA_ChrII
StructureSource_exons (12)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-39.17
TREEFAMTREEFAM_IDTF321334
DB_remarkPPA-LIN-29 protein; contains similarity to Pfam domain PF00096 (Zinc finger, C2H2 type); contains similarity to Interpro domains IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108964
Corresponding_transcriptPPA19410.1
Corresponding_proteinPP55287
Corresponding_oligo_setGPL14372_Probes_17978
GPL14372_Probes_17979
GPL14372_Probes_17980
GPL14372_Probes_17981
GPL14372_Probes_17982
Microarray_resultsGPL14372_Probes_17978
GPL14372_Probes_17979
GPL14372_Probes_17980
GPL14372_Probes_17981
GPL14372_Probes_17982
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-39.17Curator_confirmedWBPerson4055
Methodcurated