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WormBase Tree Display for CDS: PPA19413

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Name Class

PPA19413SMapS_parentSequencePPA_ChrII
StructureSource_exons (50)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-39.40
TREEFAMTREEFAM_IDTF313149
DB_remarkPPA-KIN-4 protein; contains similarity to Pfam domains PF00069 (Protein kinase domain), PF08926 (Domain of unknown function (DUF1908)), PF17820 (PDZ domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR041489 (PDZ domain 6), IPR001478 (PDZ domain), IPR036034 (PDZ superfamily), IPR015022 (Microtubule-associated serine/threonine-protein kinase, pre-PK domain), IPR000719 (Protein kinase domain), IPR023142 (Microtubule-associated serine/threonine-protein kinase, pre-PK domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00108967
Corresponding_transcriptPPA19413.1
Corresponding_proteinPP59144
Corresponding_oligo_setGPL14372_Probes_89507
GPL14372_Probes_89508
GPL14372_Probes_89509
GPL14372_Probes_89510
GPL14372_Probes_89511
GPL14372_Probes_89512
Microarray_resultsGPL14372_Probes_89507
GPL14372_Probes_89508
GPL14372_Probes_89509
GPL14372_Probes_89510
GPL14372_Probes_89511
GPL14372_Probes_89512
RNASeq_FPKMWBls:00000325.96818From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-39.40Curator_confirmedWBPerson4055
Methodcurated