WormBase Tree Display for CDS: PPA19432
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PPA19432 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (86) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-41.70 | ||
DB_remark | contains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00108986 | ||||
Corresponding_transcript | PPA19432.1 | |||||
Corresponding_protein | PP65745 | |||||
Corresponding_oligo_set (25) | ||||||
Matching_cDNA | EB183829 | Inferred_automatically | transcript_builder.pl | |||
FE933718 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results (25) | ||||||
RNASeq_FPKM | WBls:0000032 | 3.47472 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 9.11837 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-41.70 | Curator_confirmed | WBPerson4055 | |||
Method | curated |