WormBase Tree Display for CDS: PPA19476
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PPA19476 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 57 | |||
236 | 347 | |||||
469 | 569 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-43.7 | ||
DB_remark | PPA-PFN-1.3 protein; contains similarity to Pfam domain PF00235 (Profilin); contains similarity to Interpro domains IPR036140 (Profilin superfamily), IPR005455 (Profilin, eukaryotic type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00109030 | ||||
Corresponding_transcript | PPA19476.1 | |||||
Corresponding_protein | PP64969 | |||||
RNASeq_FPKM | WBls:0000032 | 42.7456 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-43.7 | Curator_confirmed | WBPerson4055 | |||
Method | curated |