WormBase Tree Display for CDS: PPA19537
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PPA19537 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 114 | |||
153 | 215 | |||||
310 | 369 | |||||
484 | 582 | |||||
726 | 815 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S278-4.60 | ||
DB_remark | contains similarity to Pfam domain PF01187 (Macrophage migration inhibitory factor (MIF)); contains similarity to Interpro domains IPR014347 (Tautomerase/MIF superfamily), IPR001398 (Macrophage migration inhibitory factor) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00109091 | ||||
Corresponding_transcript | PPA19537.1 | |||||
Corresponding_protein | PP62192 | |||||
Corresponding_oligo_set | GPL14372_Probes_60312 | |||||
GPL14372_Probes_60313 | ||||||
Microarray_results | GPL14372_Probes_60312 | |||||
GPL14372_Probes_60313 | ||||||
RNASeq_FPKM | WBls:0000032 | 57.8222 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 17.0861 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S278-4.60 | Curator_confirmed | WBPerson4055 | |||
Method | curated |