WormBase Tree Display for CDS: PPA19695

PPA19695 Evidence: Inferred_automatically: make_isoforms.pl
  SMap: S_parent: Sequence: PPA_ChrX
  Structure: Source_exons: 1 195
      1349 1531
      2015 2146
      2654 2773
      2917 3077
      4134 4191
      4273 4357
      5496 5653
      5864 5934
      6125 6266
  DB_info: Database: pristionchus.org cds gene-UMM-S285-6.8
      TREEFAM TREEFAM_ID TF300882
    DB_remark: PPA-BCAT-1 protein; contains similarity to Pfam domain PF01063 (Amino-transferase class IV); contains similarity to Interpro domains IPR036038 (Aminotransferase-like, PLP-dependent enzymes), IPR005786 (Branched-chain amino acid aminotransferase II), IPR001544 (Aminotransferase class IV), IPR043131 (Branched-chain-amino-acid aminotransferase-like, N-terminal), IPR043132 (Branched-chain-amino-acid aminotransferase-like, C-terminal)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00109249
    Corresponding_transcript: PPA19695.1
    Corresponding_protein: PP72311
    Corresponding_oligo_set: GPL14372_Probes_4190
      GPL14372_Probes_4191
    Matching_cDNA: CK928313 Inferred_automatically: transcript_builder.pl
      CN442752 Inferred_automatically: transcript_builder.pl
      AI989038 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_4190
      GPL14372_Probes_4191
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 2.92203 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S285-6.8 Curator_confirmed: WBPerson4055
  Method: curated