WormBase Tree Display for CDS: PPA19739
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PPA19739 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (30) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMA-S10-78.20 | ||
DB_remark | contains similarity to Pfam domains PF00069 (Protein kinase domain), PF01266 (FAD dependent oxidoreductase); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR006076 (FAD dependent oxidoreductase), IPR000719 (Protein kinase domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00109293 | ||||
Corresponding_transcript | PPA19739.1 | |||||
Corresponding_protein | PP56620 | |||||
Corresponding_oligo_set | GPL14372_Probes_45887 | |||||
GPL14372_Probes_59432 | ||||||
Microarray_results | GPL14372_Probes_45887 | |||||
GPL14372_Probes_59432 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 1.6003 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMA-S10-78.20 | Curator_confirmed | WBPerson4055 | |||
Method | curated |