Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for CDS: PPA19802

expand all nodes | collapse all nodes | view schema

Name Class

PPA19802SMapS_parentSequencePPA_ChrIII
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMA-S341-3.90
DB_remarkPPA-DGK-3 protein; contains similarity to Pfam domains PF00130 (Phorbol esters/diacylglycerol binding domain (C1 domain)), PF00609 (Diacylglycerol kinase accessory domain), PF00781 (Diacylglycerol kinase catalytic domain), PF14513 (Diacylglycerol kinase N-terminus); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR000756 (Diacylglycerol kinase, accessory domain), IPR017438 (Inorganic polyphosphate/ATP-NAD kinase, N-terminal), IPR001206 (Diacylglycerol kinase, catalytic domain), IPR011992 (EF-hand domain pair), IPR029477 (Diacylglycerol kinase type I, N-terminal), IPR038199 (DGK type I, N-terminal domain superfamily), IPR002219 (Protein kinase C-like, phorbol ester/diacylglycerol-binding domain), IPR037607 (Diacylglycerol kinase), IPR016064 (NAD kinase/diacylglycerol kinase-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00109356
Corresponding_transcriptPPA19802.1
Corresponding_proteinPP51488
Corresponding_oligo_setGPL14372_Probes_17140
GPL14372_Probes_17141
GPL14372_Probes_17143
Microarray_resultsGPL14372_Probes_17140
GPL14372_Probes_17141
GPL14372_Probes_17143
RNASeq_FPKMWBls:000003214.1972From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.31477From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMA-S341-3.90Curator_confirmedWBPerson4055
Methodcurated