WormBase Tree Display for CDS: PPA19972a

PPA19972a Evidence: Curator_confirmed: WBPerson4055
  SMap: S_parent: Sequence: PPA_ChrIII
  Structure: Source_exons: 1 22
      434 563
      1253 1416
      1487 1610
      1687 1805
      1913 1992
      2034 2139
      2242 2293
      2536 2593
      2667 2780
      2852 2944
      3318 3465
      3850 3946
      3989 4055
      4100 4204
      4249 4332
      4636 4755
      4920 5024
      5155 5229
      5285 5380
      5565 5639
      5681 5773
      5833 5916
      5996 6152
      6234 6340
      6385 6480
      6527 6618
      6671 6773
      6885 7019
      7082 7205
      7340 7478
      7572 7704
      7751 7859
      8426 8584
      9201 9257
      9488 9633
      9679 9803
      9850 9925
      9970 10119
      10164 10235
      10293 10427
      10494 10649
      10699 10811
      10934 11036
      11082 11219
      11307 11456
      11536 11637
      11724 11843
      11925 11975
      12040 12105
      12149 12280
      12389 12498
      12573 12639
      12785 12928
      12972 13045
      13088 13187
      13265 13411
      13463 13591
  DB_info: Database: pristionchus.org cds gene-UMM-S66-4.10
    DB_remark: PPA-UNC-79 protein; contains similarity to Pfam domain PF14776 (Cation-channel complex subunit UNC-79); contains similarity to Interpro domains IPR024855 (UNC79), IPR016024 (Armadillo-type fold)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Predicted
    Isoform: Curator_confirmed: WBPerson4055
  Visible: Gene: WBGene00109526
    Corresponding_transcript: PPA19972a.1
    Corresponding_protein: PP75410
    Corresponding_oligo_set: GPL14372_Probes_17252
      GPL14372_Probes_67072
      GPL14372_Probes_67073
    Microarray_results: GPL14372_Probes_17252
      GPL14372_Probes_67072
      GPL14372_Probes_67073
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Last_reviewed: 11 Sep 2019 16:39:12 WBPerson4055
    Remark: [171116 mh6] renamed from gene-UMM-S66-4.10 Curator_confirmed: WBPerson4055
      [190911 mh6] This CDS has been updated based on the RNAseq data. Curator_confirmed: WBPerson4055
        From_analysis: RNASeq
  Method: curated