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WormBase Tree Display for CDS: PPA20030

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Name Class

PPA20030SMapS_parentSequencePPA_ChrIV
StructureSource_exons1137
208292
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2840-77.14
TREEFAMTREEFAM_IDTF300720
DB_remarkPPA-CTH-2 protein; contains similarity to Pfam domain PF01053 (Cys/Met metabolism PLP-dependent enzyme); contains similarity to Interpro domains IPR000277 (Cys/Met metabolism, pyridoxal phosphate-dependent enzyme), IPR015424 (Pyridoxal phosphate-dependent transferase), IPR015422 (Pyridoxal phosphate-dependent transferase, small domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00109584
Corresponding_transcriptPPA20030.1
Corresponding_proteinPP66834
Corresponding_oligo_setGPL14372_Probes_32370
Microarray_resultsGPL14372_Probes_32370
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S2840-77.14Curator_confirmedWBPerson4055
Methodcurated