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WormBase Tree Display for CDS: PPA20087

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Name Class

PPA20087SMapS_parentSequencePPA_ChrI
StructureSource_exons (14)
DB_infoDatabasepristionchus.orgcdsgene-UMS-S139-6.52
TREEFAMTREEFAM_IDTF319848
DB_remarkPPA-ENDU-1 protein; contains similarity to Pfam domain PF09412 (Endoribonuclease XendoU); contains similarity to Interpro domains IPR037227 (Endoribonuclease EndoU-like), IPR018998 (EndoU ribonuclease, C-terminal), IPR039787 (Poly(U)-specific endoribonuclease)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00109641
Corresponding_transcriptPPA20087.1
Corresponding_proteinPP52626
Corresponding_oligo_setGPL14372_Probes_87000
GPL14372_Probes_87001
GPL14372_Probes_87002
GPL14372_Probes_87003
Microarray_resultsGPL14372_Probes_87000
GPL14372_Probes_87001
GPL14372_Probes_87002
GPL14372_Probes_87003
RNASeq_FPKMWBls:000003227.7598From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001019.36826From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMS-S139-6.52Curator_confirmedWBPerson4055
Methodcurated