WormBase Tree Display for CDS: PPA20122

PPA20122 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons (12)
  DB_info: Database: pristionchus.org cds gene-UMM-S139-11.25
      TREEFAM TREEFAM_ID TF314645
    DB_remark: PPA-UFBP-1 protein; contains similarity to Pfam domain PF09756 (DDRGK domain); contains similarity to Interpro domains IPR019153 (DDRGK domain containing protein), IPR036390 (Winged helix DNA-binding domain superfamily), IPR036388 (Winged helix-like DNA-binding domain superfamily)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00109676
    Corresponding_transcript: PPA20122.1
    Corresponding_protein: PP43626
    Corresponding_oligo_set: GPL14372_Probes_88036
      GPL14372_Probes_88037
      GPL14372_Probes_88038
      GPL14372_Probes_88039
    Matching_cDNA: FG103927 Inferred_automatically: transcript_builder.pl
      FE941680 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_88036
      GPL14372_Probes_88037
      GPL14372_Probes_88038
      GPL14372_Probes_88039
    RNASeq_FPKM: WBls:0000032 50.6534 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 35.8967 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S139-11.25 Curator_confirmed: WBPerson4055
  Method: curated