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WormBase Tree Display for CDS: PPA20135

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Name Class

PPA20135SMapS_parentSequencePPA_ChrI
StructureSource_exons1116
395491
23942542
37803822
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-3.54
TREEFAMTREEFAM_IDTF314214
DB_remarkcontains similarity to Pfam domain PF02807 (ATP:guanido phosphotransferase, N-terminal domain); contains similarity to Interpro domains IPR022413 (ATP:guanido phosphotransferase, N-terminal), IPR036802 (ATP:guanido phosphotransferase, N-terminal domain superfamily), IPR000749 (ATP:guanido phosphotransferase)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00109689
Corresponding_transcriptPPA20135.1
Corresponding_proteinPP54570
Corresponding_oligo_setGPL14372_Probes_87087
Microarray_resultsGPL14372_Probes_87087
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-3.54Curator_confirmedWBPerson4055
Methodcurated