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WormBase Tree Display for CDS: PPA20150

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Name Class

PPA20150SMapS_parentSequencePPA_ChrI
StructureSource_exons (46)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S139-3.58
DB_remarkcontains similarity to Pfam domain PF01485 (IBR domain, a half RING-finger domain); contains similarity to Interpro domains IPR001841 (Zinc finger, RING-type), IPR031127 (E3 ubiquitin ligase RBR family), IPR002867 (IBR domain), IPR013083 (Zinc finger, RING/FYVE/PHD-type)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
End_not_found
VisibleGeneWBGene00109704
Corresponding_transcriptPPA20150.1
Corresponding_proteinPP63149
Corresponding_oligo_setGPL14372_Probes_30630
GPL14372_Probes_30631
GPL14372_Probes_30632
GPL14372_Probes_30633
GPL14372_Probes_87110
GPL14372_Probes_87111
GPL14372_Probes_87112
Microarray_resultsGPL14372_Probes_30630
GPL14372_Probes_30631
GPL14372_Probes_30632
GPL14372_Probes_30633
GPL14372_Probes_87110
GPL14372_Probes_87111
GPL14372_Probes_87112
RNASeq_FPKMWBls:00000321.42927From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.37568From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S139-3.58Curator_confirmedWBPerson4055
Methodcurated