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WormBase Tree Display for CDS: PPA20294

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Name Class

PPA20294EvidenceCurator_confirmedWBPerson4055
Inferred_automaticallymake_isoforms.pl
SMapS_parentSequencePPA_ChrX
StructureSource_exons (15)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S2857-2.11
DB_remarkPPA-NUCB-1 protein; contains similarity to Pfam domain PF13499 (EF-hand domain pair); contains similarity to Interpro domains IPR002048 (EF-hand domain), IPR040250 (Nucleobindin), IPR011992 (EF-hand domain pair)
OriginFrom_laboratoryHX
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00109848
Corresponding_transcriptPPA20294.1
Corresponding_proteinPP75337
Corresponding_oligo_setGPL14372_Probes_76631
GPL14372_Probes_76632
Microarray_resultsGPL14372_Probes_76631
GPL14372_Probes_76632
RNASeq_FPKMWBls:00000322.73608From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Last_reviewed25 Sep 2019 10:56:09WBPerson4055
Remark[171116 mh6] renamed from gene-UMM-S2857-2.11Curator_confirmedWBPerson4055
[190925 mh6] This gene has been split based on the RNASeq data.Curator_confirmedWBPerson4055
From_analysisRNASeq
Methodcurated