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WormBase Tree Display for CDS: PPA20410

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Name Class

PPA20410SMapS_parentSequencePPA_ChrIII
StructureSource_exons1124
529609
838896
16621761
20402139
26532803
DB_infoDatabasepristionchus.orgcdsgene-UMM-S112-12.1
DB_remarkPPA-BLI-5 protein; contains similarity to Pfam domain PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain); contains similarity to Interpro domains IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00109964
Corresponding_transcriptPPA20410.1
Corresponding_proteinPP53492
Corresponding_oligo_setGPL14372_Probes_81954
GPL14372_Probes_81955
Microarray_resultsGPL14372_Probes_81954
GPL14372_Probes_81955
RNASeq_FPKMWBls:000003215.6624From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010127.7568From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S112-12.1Curator_confirmedWBPerson4055
Methodcurated