WormBase Tree Display for CDS: PPA20410
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PPA20410 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 124 | |||
529 | 609 | |||||
838 | 896 | |||||
1662 | 1761 | |||||
2040 | 2139 | |||||
2653 | 2803 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S112-12.1 | ||
DB_remark | PPA-BLI-5 protein; contains similarity to Pfam domain PF00014 (Kunitz/Bovine pancreatic trypsin inhibitor domain); contains similarity to Interpro domains IPR036880 (Pancreatic trypsin inhibitor Kunitz domain superfamily), IPR002223 (Pancreatic trypsin inhibitor Kunitz domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00109964 | ||||
Corresponding_transcript | PPA20410.1 | |||||
Corresponding_protein | PP53492 | |||||
Corresponding_oligo_set | GPL14372_Probes_81954 | |||||
GPL14372_Probes_81955 | ||||||
Microarray_results | GPL14372_Probes_81954 | |||||
GPL14372_Probes_81955 | ||||||
RNASeq_FPKM | WBls:0000032 | 15.6624 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 27.7568 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S112-12.1 | Curator_confirmed | WBPerson4055 | |||
Method | curated |