WormBase Tree Display for CDS: PPA20485
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PPA20485 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (13) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S259-2.38 | ||
DB_remark | contains similarity to Pfam domain PF00300 (Histidine phosphatase superfamily (branch 1)); contains similarity to Interpro domains IPR029033 (Histidine phosphatase superfamily), IPR013078 (Histidine phosphatase superfamily, clade-1) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00110039 | ||||
Corresponding_transcript | PPA20485.1 | |||||
Corresponding_protein | PP55933 | |||||
Corresponding_oligo_set | GPL14372_Probes_73362 | |||||
GPL14372_Probes_73363 | ||||||
Microarray_results | GPL14372_Probes_73362 | |||||
GPL14372_Probes_73363 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 4.16265 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S259-2.38 | Curator_confirmed | WBPerson4055 | |||
Method | curated |