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WormBase Tree Display for CDS: PPA20515

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Name Class

PPA20515SMapS_parentSequencePPA_ChrI
StructureSource_exons (22)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-7.48
DB_remarkcontains similarity to Pfam domain PF01145 (SPFH domain / Band 7 family); contains similarity to Interpro domains IPR001972 (Stomatin/HflK family), IPR043202 (Band-7 stomatin-like), IPR036013 (Band 7/SPFH domain superfamily), IPR001107 (Band 7 domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00110069
Corresponding_transcriptPPA20515.1
Corresponding_proteinPP53165
Corresponding_oligo_setGPL14372_Probes_24446
GPL14372_Probes_24447
GPL14372_Probes_77521
GPL14372_Probes_77522
GPL14372_Probes_77523
GPL14372_Probes_77525
GPL14372_Probes_77526
Microarray_resultsGPL14372_Probes_24446
GPL14372_Probes_24447
GPL14372_Probes_77521
GPL14372_Probes_77522
GPL14372_Probes_77523
GPL14372_Probes_77525
GPL14372_Probes_77526
RNASeq_FPKMWBls:000003215.0515From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.94992From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-7.48Curator_confirmedWBPerson4055
Methodcurated