WormBase Tree Display for CDS: PPA20723
expand all nodes | collapse all nodes | view schema
PPA20723 | SMap | S_parent | Sequence | PPA_ChrX | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 113 | |||
261 | 324 | |||||
431 | 499 | |||||
516 | 754 | |||||
797 | 930 | |||||
1060 | 1185 | |||||
1284 | 1368 | |||||
1442 | 1535 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2845-15.48 | ||
DB_remark | contains similarity to Pfam domain PF10320 (Serpentine type 7TM GPCR chemoreceptor Srsx); contains similarity to Interpro domains IPR019424 (Serpentine type 7TM GPCR chemoreceptor Srsx), IPR000276 (G protein-coupled receptor, rhodopsin-like) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00110277 | ||||
Corresponding_transcript | PPA20723.1 | |||||
Corresponding_protein | PP70967 | |||||
Corresponding_oligo_set | GPL14372_Probes_22413 | |||||
GPL14372_Probes_22414 | ||||||
GPL14372_Probes_22415 | ||||||
GPL14372_Probes_22416 | ||||||
Microarray_results | GPL14372_Probes_22413 | |||||
GPL14372_Probes_22414 | ||||||
GPL14372_Probes_22415 | ||||||
GPL14372_Probes_22416 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2845-15.48 | Curator_confirmed | WBPerson4055 | |||
Method | curated |