WormBase Tree Display for CDS: PPA20944
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PPA20944 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (20) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMS-S10-56.0 | ||
TREEFAM | TREEFAM_ID | TF313588 | ||||
DB_remark | PPA-AMT-3 protein; contains similarity to Pfam domain PF00909 (Ammonium Transporter Family); contains similarity to Interpro domains IPR024041 (Ammonium transporter AmtB-like domain), IPR029020 (Ammonium/urea transporter) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00110498 | ||||
Corresponding_transcript | PPA20944.1 | |||||
Corresponding_protein | PP56051 | |||||
Corresponding_oligo_set | GPL14372_Probes_65436 | |||||
GPL14372_Probes_65437 | ||||||
GPL14372_Probes_65440 | ||||||
Microarray_results | GPL14372_Probes_65436 | |||||
GPL14372_Probes_65437 | ||||||
GPL14372_Probes_65440 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.19347 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.4382 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMS-S10-56.0 | Curator_confirmed | WBPerson4055 | |||
Method | curated |