WormBase Tree Display for CDS: PPA20947

PPA20947 SMap: S_parent: Sequence: PPA_ChrII
  Structure: Source_exons (34)
  DB_info: Database: pristionchus.org cds gene-UMM-S10-83.1
    DB_remark: contains similarity to Pfam domains PF00112 (Papain family cysteine protease), PF13520 (Amino acid permease), PF13906 (C-terminus of AA_permease); contains similarity to Interpro domains IPR038765 (Papain-like cysteine peptidase superfamily), IPR029485 (Cationic amino acid transporter, C-terminal), IPR000668 (Peptidase C1A, papain C-terminal), IPR002293 (Amino acid/polyamine transporter I)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00110501
    Corresponding_transcript: PPA20947.1
    Corresponding_protein: PP69969
    Corresponding_oligo_set: GPL14372_Probes_12654
      GPL14372_Probes_12655
      GPL14372_Probes_12656
      GPL14372_Probes_12657
      GPL14372_Probes_12658
      GPL14372_Probes_59341
    Microarray_results: GPL14372_Probes_12654
      GPL14372_Probes_12655
      GPL14372_Probes_12656
      GPL14372_Probes_12657
      GPL14372_Probes_12658
      GPL14372_Probes_59341
    RNASeq_FPKM: WBls:0000032 5.56385 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 1.31412 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S10-83.1 Curator_confirmed: WBPerson4055
  Method: curated