WormBase Tree Display for CDS: PPA20952
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PPA20952 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (41) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-56.28 | ||
TREEFAM | TREEFAM_ID | TF315162 | ||||
DB_remark | PPA-NMGP-1 protein; contains similarity to Pfam domain PF01275 (Myelin proteolipid protein (PLP or lipophilin)); contains similarity to Interpro domain IPR001614 (Myelin proteolipid protein PLP) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00110506 | ||||
Corresponding_transcript | PPA20952.1 | |||||
Corresponding_protein | PP51448 | |||||
Corresponding_oligo_set | GPL14372_Probes_65465 | |||||
GPL14372_Probes_65466 | ||||||
GPL14372_Probes_65467 | ||||||
GPL14372_Probes_65468 | ||||||
GPL14372_Probes_65469 | ||||||
Matching_cDNA | FE934648 | Inferred_automatically | transcript_builder.pl | |||
Microarray_results | GPL14372_Probes_65465 | |||||
GPL14372_Probes_65466 | ||||||
GPL14372_Probes_65467 | ||||||
GPL14372_Probes_65468 | ||||||
GPL14372_Probes_65469 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.85781 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 4.49985 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-56.28 | Curator_confirmed | WBPerson4055 | |||
Method | curated |