WormBase Tree Display for CDS: PPA21177
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PPA21177 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (36) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S41-52.81 | ||
DB_remark | contains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type), PF13894 (C2H2-type zinc finger); contains similarity to Interpro domain IPR013087 (Zinc finger C2H2-type) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00110731 | ||||
Corresponding_transcript | PPA21177.1 | |||||
Corresponding_protein | PP56426 | |||||
Corresponding_oligo_set | GPL14372_Probes_78796 | |||||
GPL14372_Probes_78799 | ||||||
Microarray_results | GPL14372_Probes_78796 | |||||
GPL14372_Probes_78799 | ||||||
RNASeq_FPKM | WBls:0000032 | 6.24419 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S41-52.81 | Curator_confirmed | WBPerson4055 | |||
Method | curated |