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WormBase Tree Display for CDS: PPA21204

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Name Class

PPA21204SMapS_parentSequencePPA_ChrII
StructureSource_exons (51)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S41-45.30
DB_remarkcontains similarity to Pfam domains PF00096 (Zinc finger, C2H2 type), PF00135 (Carboxylesterase family), PF10326 (Serpentine type 7TM GPCR chemoreceptor Str); contains similarity to Interpro domains IPR029058 (Alpha/Beta hydrolase fold), IPR002018 (Carboxylesterase, type B), IPR036236 (Zinc finger C2H2 superfamily), IPR013087 (Zinc finger C2H2-type), IPR019428 (7TM GPCR, serpentine receptor class r (Str))
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00110758
Corresponding_transcriptPPA21204.1
Corresponding_proteinPP61108
Corresponding_oligo_set (12)
Microarray_results (12)
RNASeq_FPKMWBls:00000323.02521From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S41-45.30Curator_confirmedWBPerson4055
Methodcurated