WormBase Tree Display for CDS: PPA21314
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PPA21314 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons (18) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-51.6 | ||
TREEFAM | TREEFAM_ID | TF101523 | ||||
DB_remark | PPA-EIF-3.L protein; contains similarity to Pfam domain PF10255 (RNA polymerase I-associated factor PAF67); contains similarity to Interpro domain IPR019382 (Translation initiation factor 3 complex subunit L) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00110868 | ||||
Corresponding_transcript | PPA21314.1 | |||||
Corresponding_protein | PP69254 | |||||
Corresponding_oligo_set | GPL14372_Probes_81192 | |||||
GPL14372_Probes_81193 | ||||||
GPL14372_Probes_81196 | ||||||
GPL14372_Probes_81197 | ||||||
GPL14372_Probes_81198 | ||||||
Microarray_results | GPL14372_Probes_81192 | |||||
GPL14372_Probes_81193 | ||||||
GPL14372_Probes_81196 | ||||||
GPL14372_Probes_81197 | ||||||
GPL14372_Probes_81198 | ||||||
RNASeq_FPKM | WBls:0000032 | 11.0651 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 7.84094 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-51.6 | Curator_confirmed | WBPerson4055 | |||
Method | curated |