WormBase Tree Display for CDS: PPA21358
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PPA21358 | SMap | S_parent | Sequence | PPA_ChrII | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 67 | |||
618 | 679 | |||||
898 | 1006 | |||||
1420 | 1511 | |||||
1735 | 1809 | |||||
2653 | 2790 | |||||
3241 | 3330 | |||||
3625 | 3765 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S10-49.23 | ||
TREEFAM | TREEFAM_ID | TF351612 | ||||
DB_remark | PPA-UNC-4 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00110912 | ||||
Corresponding_transcript | PPA21358.1 | |||||
Corresponding_protein | PP39056 | |||||
Corresponding_oligo_set | GPL14372_Probes_81253 | |||||
GPL14372_Probes_81254 | ||||||
Microarray_results | GPL14372_Probes_81253 | |||||
GPL14372_Probes_81254 | ||||||
RNASeq_FPKM | WBls:0000032 | 16.9564 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S10-49.23 | Curator_confirmed | WBPerson4055 | |||
Method | curated |