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WormBase Tree Display for CDS: PPA21358

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Name Class

PPA21358SMapS_parentSequencePPA_ChrII
StructureSource_exons167
618679
8981006
14201511
17351809
26532790
32413330
36253765
DB_infoDatabasepristionchus.orgcdsgene-UMM-S10-49.23
TREEFAMTREEFAM_IDTF351612
DB_remarkPPA-UNC-4 protein; contains similarity to Pfam domain PF00046 (Homeodomain); contains similarity to Interpro domains IPR001356 (Homeobox domain), IPR009057 (Homeobox-like domain superfamily)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00110912
Corresponding_transcriptPPA21358.1
Corresponding_proteinPP39056
Corresponding_oligo_setGPL14372_Probes_81253
GPL14372_Probes_81254
Microarray_resultsGPL14372_Probes_81253
GPL14372_Probes_81254
RNASeq_FPKMWBls:000003216.9564From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S10-49.23Curator_confirmedWBPerson4055
Methodcurated