WormBase Tree Display for CDS: PPA21606
expand all nodes | collapse all nodes | view schema
PPA21606 | SMap | S_parent | Sequence | PPA_ChrIV | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 103 | |||
303 | 445 | |||||
712 | 849 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S2838-42.39 | ||
DB_remark | contains similarity to Pfam domain PF01681 (C6 domain); contains similarity to Interpro domain IPR002601 (C6 domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111160 | ||||
Corresponding_transcript | PPA21606.1 | |||||
Corresponding_protein | PP56730 | |||||
Corresponding_oligo_set | GPL14372_Probes_72137 | |||||
GPL14372_Probes_72138 | ||||||
GPL14372_Probes_72139 | ||||||
Microarray_results | GPL14372_Probes_72137 | |||||
GPL14372_Probes_72138 | ||||||
GPL14372_Probes_72139 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 63.077 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S2838-42.39 | Curator_confirmed | WBPerson4055 | |||
Method | curated |