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WormBase Tree Display for CDS: PPA21645

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Name Class

PPA21645SMapS_parentSequencePPA_ChrI
StructureSource_exons154
260371
487616
660777
821937
9821071
11181216
12641377
14211500
15441703
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-5.7
DB_remarkcontains similarity to Pfam domains PF00339 (Arrestin (or S-antigen), N-terminal domain), PF02752 (Arrestin (or S-antigen), C-terminal domain); contains similarity to Interpro domains IPR014756 (Immunoglobulin E-set), IPR011022 (Arrestin C-terminal-like domain), IPR014752 (Arrestin-like, C-terminal), IPR011021 (Arrestin-like, N-terminal)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00111199
Corresponding_transcriptPPA21645.1
Corresponding_proteinPP54250
Corresponding_oligo_setGPL14372_Probes_77647
GPL14372_Probes_77648
GPL14372_Probes_77649
GPL14372_Probes_77650
Microarray_resultsGPL14372_Probes_77647
GPL14372_Probes_77648
GPL14372_Probes_77649
GPL14372_Probes_77650
RNASeq_FPKMWBls:00000327.41257From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.133From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-5.7Curator_confirmedWBPerson4055
Methodcurated