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WormBase Tree Display for CDS: PPA21650

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Name Class

PPA21650SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-5.19
TREEFAMTREEFAM_IDTF313435
DB_remarkcontains similarity to Pfam domain PF00069 (Protein kinase domain); contains similarity to Interpro domains IPR011009 (Protein kinase-like domain superfamily), IPR011989 (Armadillo-like helical), IPR000719 (Protein kinase domain), IPR016024 (Armadillo-type fold)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111204
Corresponding_transcriptPPA21650.1
Corresponding_proteinPP55339
Corresponding_oligo_setGPL14372_Probes_77632
GPL14372_Probes_77633
Matching_cDNAAW052660Inferred_automaticallytranscript_builder.pl
BQ088317Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_77632
GPL14372_Probes_77633
RNASeq_FPKMWBls:00000326.62026From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.90922From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-5.19Curator_confirmedWBPerson4055
Methodcurated