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WormBase Tree Display for CDS: PPA21665

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Name Class

PPA21665SMapS_parentSequencePPA_ChrI
StructureSource_exons (20)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-6.38
TREEFAMTREEFAM_IDTF315033
DB_remarkPPA-IDHB-1 protein; contains similarity to Pfam domain PF00180 (Isocitrate/isopropylmalate dehydrogenase); contains similarity to Interpro domains IPR004434 (Isocitrate dehydrogenase NAD-dependent), IPR024084 (Isopropylmalate dehydrogenase-like domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPredicted
VisibleGeneWBGene00111219
Corresponding_transcriptPPA21665.1
Corresponding_proteinPP73203
Corresponding_oligo_setGPL14372_Probes_77574
GPL14372_Probes_77575
GPL14372_Probes_77576
GPL14372_Probes_77578
GPL14372_Probes_77579
GPL14372_Probes_77580
GPL14372_Probes_77581
GPL14372_Probes_77582
GPL14372_Probes_77583
Microarray_resultsGPL14372_Probes_77574
GPL14372_Probes_77575
GPL14372_Probes_77576
GPL14372_Probes_77578
GPL14372_Probes_77579
GPL14372_Probes_77580
GPL14372_Probes_77581
GPL14372_Probes_77582
GPL14372_Probes_77583
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010119.1026From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-6.38Curator_confirmedWBPerson4055
Methodcurated