WormBase Tree Display for CDS: PPA21667
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PPA21667 | Evidence | Curator_confirmed | WBPerson4055 | |||
---|---|---|---|---|---|---|
SMap | S_parent | Sequence | PPA_ChrI | |||
Structure | Source_exons (28) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-6.55 | ||
TREEFAM | TREEFAM_ID | TF329226 | ||||
DB_remark | PPA-SYM-4 protein; contains similarity to Pfam domain PF00400 (WD domain, G-beta repeat); contains similarity to Interpro domains IPR001680 (WD40 repeat), IPR036322 (WD40-repeat-containing domain superfamily), IPR040324 (WD repeat-containing protein WDR44/Dgr2) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111221 | ||||
Corresponding_transcript | PPA21667.1 | |||||
Corresponding_protein | PP74338 | |||||
Corresponding_oligo_set | GPL14372_Probes_77570 | |||||
GPL14372_Probes_77572 | ||||||
Microarray_results | GPL14372_Probes_77570 | |||||
GPL14372_Probes_77572 | ||||||
RNASeq_FPKM | WBls:0000032 | 2.00019 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.3621 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Last_reviewed | 21 Feb 2019 09:52:30 | WBPerson4055 | ||||
Remark | [171116 mh6] renamed from gene-UMM-S207-6.55 | Curator_confirmed | WBPerson4055 | |||
[190221 mh6] updated to the latest set provided my MPG | Curator_confirmed | WBPerson18244 | ||||
Method | curated |