WormBase Tree Display for CDS: PPA21685

PPA21685 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 123
      423 503
      672 782
      1258 1378
      1429 1482
      1532 1646
      1774 1838
      1888 1961
      2054 2122
      2225 2335
  DB_info: Database: pristionchus.org cds gene-UMM-S207-7.59
      TREEFAM TREEFAM_ID TF312839
    DB_remark: PPA-GYG-1 protein; contains similarity to Pfam domain PF01501 (Glycosyl transferase family 8); contains similarity to Interpro domains IPR002495 (Glycosyl transferase, family 8), IPR029044 (Nucleotide-diphospho-sugar transferases)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00111239
    Corresponding_transcript: PPA21685.1
    Corresponding_protein: PP12039
    Corresponding_oligo_set: GPL14372_Probes_77512
      GPL14372_Probes_77513
      GPL14372_Probes_77514
      GPL14372_Probes_77515
      GPL14372_Probes_77516
    Matching_cDNA: FG095109 Inferred_automatically: transcript_builder.pl
      BI500388 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_77512
      GPL14372_Probes_77513
      GPL14372_Probes_77514
      GPL14372_Probes_77515
      GPL14372_Probes_77516
    RNASeq_FPKM: WBls:0000032 49.246 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 74.0341 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S207-7.59 Curator_confirmed: WBPerson4055
  Method: curated