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WormBase Tree Display for CDS: PPA21691

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Name Class

PPA21691SMapS_parentSequencePPA_ChrI
StructureSource_exons167
315370
15721628
16961758
18321909
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-7.76
DB_remarkcontains similarity to Interpro domains IPR011001 (Saposin-like), IPR008139 (Saposin B type domain)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111245
Corresponding_transcriptPPA21691.1
Corresponding_proteinPP13489
Corresponding_oligo_setGPL14372_Probes_77483
GPL14372_Probes_77484
Matching_cDNABM566470Inferred_automaticallytranscript_builder.pl
FG097695Inferred_automaticallytranscript_builder.pl
FG097182Inferred_automaticallytranscript_builder.pl
FG096892Inferred_automaticallytranscript_builder.pl
BM565967Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_77483
GPL14372_Probes_77484
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-7.76Curator_confirmedWBPerson4055
Methodcurated