WormBase Tree Display for CDS: PPA21691
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PPA21691 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 67 | |||
315 | 370 | |||||
1572 | 1628 | |||||
1696 | 1758 | |||||
1832 | 1909 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-7.76 | ||
DB_remark | contains similarity to Interpro domains IPR011001 (Saposin-like), IPR008139 (Saposin B type domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Partially_confirmed | |||||
Visible | Gene | WBGene00111245 | ||||
Corresponding_transcript | PPA21691.1 | |||||
Corresponding_protein | PP13489 | |||||
Corresponding_oligo_set | GPL14372_Probes_77483 | |||||
GPL14372_Probes_77484 | ||||||
Matching_cDNA | BM566470 | Inferred_automatically | transcript_builder.pl | |||
FG097695 | Inferred_automatically | transcript_builder.pl | ||||
FG097182 | Inferred_automatically | transcript_builder.pl | ||||
FG096892 | Inferred_automatically | transcript_builder.pl | ||||
BM565967 | Inferred_automatically | transcript_builder.pl | ||||
Microarray_results | GPL14372_Probes_77483 | |||||
GPL14372_Probes_77484 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-7.76 | Curator_confirmed | WBPerson4055 | |||
Method | curated |