WormBase Tree Display for CDS: PPA21714

PPA21714 SMap: S_parent: Sequence: PPA_ChrI
  Structure: Source_exons: 1 108
      191 316
      597 717
      835 925
      1121 1222
      1398 1502
      1601 1661
  DB_info: Database: pristionchus.org cds gene-UMM-S207-8.78
      TREEFAM TREEFAM_ID TF313041
    DB_remark: PPA-SYF-2 protein; contains similarity to Pfam domain PF08231 (SYF2 splicing factor); contains similarity to Interpro domain IPR013260 (mRNA splicing factor SYF2)
  Origin: From_laboratory: RS
    Species: Pristionchus pacificus
  Properties: Coding: CDS
      CDS_predicted_by: pristionchus.org
      Prediction_status: Partially_confirmed
  Visible: Gene: WBGene00111268
    Corresponding_transcript: PPA21714.1
    Corresponding_protein: PP10830
    Corresponding_oligo_set: GPL14372_Probes_77380
      GPL14372_Probes_77381
      GPL14372_Probes_77383
      GPL14372_Probes_77384
    Matching_cDNA: AW114838 Inferred_automatically: transcript_builder.pl
      FG097743 Inferred_automatically: transcript_builder.pl
      FG101855 Inferred_automatically: transcript_builder.pl
      FG101942 Inferred_automatically: transcript_builder.pl
    Microarray_results: GPL14372_Probes_77380
      GPL14372_Probes_77381
      GPL14372_Probes_77383
      GPL14372_Probes_77384
    RNASeq_FPKM: WBls:0000032 82.098 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 231.275 From_analysis: RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Remark: [171116 mh6] renamed from gene-UMM-S207-8.78 Curator_confirmed: WBPerson4055
  Method: curated