WormBase Tree Display for CDS: PPA21733
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PPA21733 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (32) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-9.3 | ||
DB_remark | contains similarity to Pfam domain PF03619 (Organic solute transporter Ostalpha); contains similarity to Interpro domain IPR005178 (Organic solute transporter subunit alpha/Transmembrane protein 184) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
End_not_found | ||||||
Visible | Gene | WBGene00111287 | ||||
Corresponding_transcript | PPA21733.1 | |||||
Corresponding_protein | PP57604 | |||||
Corresponding_oligo_set | GPL14372_Probes_24425 | |||||
GPL14372_Probes_24426 | ||||||
GPL14372_Probes_24427 | ||||||
Microarray_results | GPL14372_Probes_24425 | |||||
GPL14372_Probes_24426 | ||||||
GPL14372_Probes_24427 | ||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 3.19257 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-9.3 | Curator_confirmed | WBPerson4055 | |||
Method | curated |