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WormBase Tree Display for CDS: PPA21736

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Name Class

PPA21736SMapS_parentSequencePPA_ChrI
StructureSource_exons (23)
DB_infoDatabasepristionchus.orgcdsgene-UMM-S207-9.11
TREEFAMTREEFAM_IDTF315773
DB_remarkPPA-TTR-39.2 protein; contains similarity to Pfam domain PF01060 (Transthyretin-like family); contains similarity to Interpro domains IPR038479 (Transthyretin-like superfamily), IPR001534 (Transthyretin-like)
OriginFrom_laboratoryRS
SpeciesPristionchus pacificus
PropertiesCodingCDS
CDS_predicted_bypristionchus.org
Prediction_statusPartially_confirmed
VisibleGeneWBGene00111290
Corresponding_transcriptPPA21736.1
Corresponding_proteinPP70617
Corresponding_oligo_setGPL14372_Probes_24416
GPL14372_Probes_24417
GPL14372_Probes_24418
GPL14372_Probes_24419
GPL14372_Probes_24420
GPL14372_Probes_24423
GPL14372_Probes_77316
GPL14372_Probes_77317
GPL14372_Probes_77318
Matching_cDNAFG100408Inferred_automaticallytranscript_builder.pl
FG099290Inferred_automaticallytranscript_builder.pl
FG099730Inferred_automaticallytranscript_builder.pl
Microarray_resultsGPL14372_Probes_24416
GPL14372_Probes_24417
GPL14372_Probes_24418
GPL14372_Probes_24419
GPL14372_Probes_24420
GPL14372_Probes_24423
GPL14372_Probes_77316
GPL14372_Probes_77317
GPL14372_Probes_77318
RNASeq_FPKMWBls:000003264.4703From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001018.5791From_analysisRNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
Remark[171116 mh6] renamed from gene-UMM-S207-9.11Curator_confirmedWBPerson4055
Methodcurated