WormBase Tree Display for CDS: PPA21762
expand all nodes | collapse all nodes | view schema
PPA21762 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (36) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-10.50 | ||
DB_remark | PPA-NPP-15 protein; contains similarity to Interpro domains IPR037624 (Nuclear pore complex protein Nup133-like), IPR015943 (WD40/YVTN repeat-like-containing domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Start_not_found | 1 | |||||
Visible | Gene | WBGene00111316 | ||||
Corresponding_transcript | PPA21762.1 | |||||
Corresponding_protein | PP70052 | |||||
Corresponding_oligo_set | GPL14372_Probes_77264 | |||||
GPL14372_Probes_77265 | ||||||
GPL14372_Probes_77266 | ||||||
GPL14372_Probes_77267 | ||||||
Microarray_results | GPL14372_Probes_77264 | |||||
GPL14372_Probes_77265 | ||||||
GPL14372_Probes_77266 | ||||||
GPL14372_Probes_77267 | ||||||
RNASeq_FPKM | WBls:0000032 | 11.1047 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 5.24564 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-10.50 | Curator_confirmed | WBPerson4055 | |||
Method | curated |