WormBase Tree Display for CDS: PPA21770
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PPA21770 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons | 1 | 42 | |||
138 | 288 | |||||
358 | 431 | |||||
477 | 563 | |||||
629 | 787 | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-10.42 | ||
TREEFAM | TREEFAM_ID | TF315313 | ||||
DB_remark | PPA-MOMA-1 protein; contains similarity to Pfam domain PF00646 (F-box domain); contains similarity to Interpro domains IPR036047 (F-box-like domain superfamily), IPR001810 (F-box domain) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111324 | ||||
Corresponding_transcript | PPA21770.1 | |||||
Corresponding_protein | PP72162 | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-10.42 | Curator_confirmed | WBPerson4055 | |||
Method | curated |