WormBase Tree Display for CDS: PPA21811
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PPA21811 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Structure | Source_exons (55) | |||||
DB_info | Database | pristionchus.org | cds | gene-UMM-S207-13.24 | ||
DB_remark | PPA-NPP-9 protein; contains similarity to Pfam domain PF00638 (RanBP1 domain); contains similarity to Interpro domains IPR000156 (Ran binding domain), IPR001876 (Zinc finger, RanBP2-type), IPR011993 (PH-like domain superfamily) | |||||
Origin | From_laboratory | RS | ||||
Species | Pristionchus pacificus | |||||
Properties | Coding | CDS | ||||
CDS_predicted_by | pristionchus.org | |||||
Prediction_status | Predicted | |||||
Visible | Gene | WBGene00111365 | ||||
Corresponding_transcript | PPA21811.1 | |||||
Corresponding_protein | PP71413 | |||||
Corresponding_oligo_set | GPL14372_Probes_77092 | |||||
GPL14372_Probes_77093 | ||||||
Microarray_results | GPL14372_Probes_77092 | |||||
GPL14372_Probes_77093 | ||||||
RNASeq_FPKM | WBls:0000032 | 0.970117 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||
WBls:0000101 | 2.00482 | From_analysis | RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||
Remark | [171116 mh6] renamed from gene-UMM-S207-13.24 | Curator_confirmed | WBPerson4055 | |||
Method | curated |